Week 3: Workflow and RMarkdown

We want to work seamlessly, painlessly, and in such a way that you can easily find code and data many years after completing a project.

This week, we will cover RMarkdown - a language that allows integration of text and R code. We will also cover best-practices in arranging project folders.

Lecture Topics

  • What is workflow?
  • Using RProjects to organize workflow
  • Best practices in arranging project folders
  • Introduction to RMarkdown
  • Introduction to Version Control


If you’re interested in using GitHub, I also draw your attention to the folowing resources:

Code and Data

Going forward, I will include a project file for most weeks, enclosed in a .zip file. Please download the .zip file and unzip it before class starts.

Lecture slides

Slides available via speakerdeck